Risky teams, forged banknotes, frost-proof frogs

An eclectic mix of science snips from Sciencebase:

  • Novel algorithm cuts the risks of choosing ineffectual team members – The risky business of putting together a team
  • Counterfeit spectroscopy – Banknote counterfeiting is a growing problem for fraud investigators across the globe and criminals involved in this highly profitable system are constantly developing their techniques to stay one step ahead of the authorities and their forensic detection methods. Now, researchers in Brazil and the US have taken a mass spectrometric approach that can produce a near-instantaneous chemical profile of a banknote to check against database entries and spot counterfeit notes very quickly.
  • Frozen Frogs – Frost-proof tree frogs offer new clues as to how some animals protect themselves from the lethal effects of ice crystals forming within their tissues.
  • Latest chemistry news round-up from David Bradley – Buckyballs reach for the stars in this week's Alchemist chemistry news round-up while the oxygen levels in dead zones of the oceanic depths brings us back down to earth. An obvious contaminant explains why graphite oxides and related materials are wont to burst into flames and a prostate gel offers an improved diagnostic for a lethal disease. In the analytical arena, atomic absorption spectroscopy shows just how much iodine is present in a milk sample and could improve nutrition and nutritional studies. Finally, organic solar cells look set for a boost thanks to an NSF grant to aid their development over the next five years.
  • Plankton decline across oceans as waters warm – If you thought climate change was only about unfortunates living in extreme environments, then think again, the oceans and consequently all species are going to suffer if this turns out to be true: The amount of phytoplankton – tiny marine plants – in the top layers of the oceans has declined markedly over the last century, research suggests.
  • Science Online London 2010 – Nature, Mendeley, and the British Library are excited to present Science Online London 2010. How is the web changing the way we conduct, communicate, share, and evaluate research? How can we employ these trends for the greater good? This September, a brilliant group of scientists, bloggers, web entrepreneurs, and publishers will be meeting for two days to address these very questions.

Winning science writers

If I remember rightly, I first entered the Daily Telegraph Young Science Writer of the year awards in 1991 after I returned from an extended trip to Australia, I wrote about the world’s biggest organism having the world’s biggest orgasm (the annual spawning of the Great Barrier Reef) and was a runner-up that year receiving a merit award for another article about sex although the title eludes me. It was my next entry that netted me the first prize. That year it was an item entitled “Not every sperm is sacred” about the ins and outs of fertilisation and the manual research carried out to study them.

At the awards ceremony in Southampton (1992’s BA meeting), Roger Highfield quoted me as saying I’d like to one day oust him from his science editor’s desk at the Telegraph. Well, that never happened, but I have been pretty active in science communication ever since. And, I do have a book out in November – Deceived Wisdom. Meanwhile, among my fellow winners are some well-known names in scicomms, journalism and the blogosphere in general:

Ed Yong (2007) Not Exactly Rocket Science
Yfke Van Bergen (2005) THES
Claire Bithell (2003) RI
Kate Ravilious (2000) Guardian
Lynn Dicks (1999) Freelance science writer
Ian Sample (1998) Guardian
Tom Wakeford (1996) Freelance science writer
Nick Flowers (1995) Freelance science writer
Katie Mantell (1995) SciDev.net
Sharon Ann Holgate (1994) Freelance science writer
Bob Ward (1993) Royal Society
Harriet Coles (1993) Nature
David Bradley (1992) Freelance science writer
Francesca Happe (1991)
Clive Oppenheimer (1990)

Reminded of all this having revisited Ed Yong’s post On the Origin of Science Writers.

Cialis in glass and a shortage of helium

Science news links for July 23rd through July 26th:

  • ACS and RSC Sustainability Alliance – The Royal Society of Chemistry and the American Chemical Society have joined forces to launch a sustainability website. Be interesting to know what is the carbon footprint of this endeavour and the server electricity bills…
  • Carcinogen suspects – A new report from the American Cancer Society and other world-leading health groups identifies gaps in research for 20 suspected carcinogens whose potential to cause cancer is as yet unresolved. Of course, that research could prove that any one of those agents doesn't actually cause cancer at all, which will be annoying for the activists. But, it's the inclusion of "shift work" in the list that is perhaps most confusing? How do they anticipate extracting exposure to shift work from all the many other factors…?
  • No more squeaky voiced party tricks – What do MRI machines, rockets, fibre optics, LCDs, food production, welding, and lighter-than-air party balloons all have in common? They all need helium. But, we're running out of this gas and it could all be gone in less than three decades.
  • Cialis in stained glass – Chemical artwork created in stained glass shows 2D structures of theobromine (chocolate's "analog" of coffee's caffeine and coca's cocaine) as well as Lilly's answer to erectile dysfunction drug Viagra, Cialis.
  • Latest issue of The Alchemist on Chemweb – New light is shed on the crystallization processes involved in constructing polymer-based photovoltaic materials, The Alchemist this week learns, while a novel framework for improving magnetic resonance imaging is also explored. In physical science a fundamental property, the size of a proton, is not what it seems and may impact on fundamental physics, chemistry, and spectroscopy alike. New work on phytochemicals reveals that compounds found in celery and various other plants may have an anti-inflammatory effect through their interaction with a specific enzyme. Remote analysis of materials using laser fluorescence triggered by the terahertz waves emitted by explosives and chemical weapons could improve homeland security. Finally, expertise in pyrolysis has led to the establishment of a startup company at Iowa State that will help develop novel liquid bio-oils.

Headhunting goes automatic for the people

Very few people work alone in the so-called knowledge economy. Even a lowly freelance science writer has a network of editors, publishers and other associates on which they rely to get their words out to an audience. The point is even more apparent in the world of research where often vast teams of experts must pull together to generate a result. Just look at the author list on almost any genomics or post-genomics research paper from the past decade or so to see just how true that is.

Neil Rubens, Mikko Vilenius, and Toshio Okamoto of the Graduate School of Information Systems, at the University of Electro-Communications, in Tokyo, Japan, and Dain Kaplan of the Department of Computer Science, Tokyo Institute of Technology, certainly recognise this fact. They have, however, spotted the obvious flaw in collaborative working – how to find the right “expert” for the task in hand.

Writing in the International Journal of Knowledge and Web Intelligence, they have come up with a possible solution to this perennial problem. They explain that research-oriented tasks are increasingly complex in nature and require more sophisticated networks of experts. In the past, finding a single expert for a task or pulling together an expert group was done in an almost ad hoc manner. They have now devised a method that could automate the process and allow the best experts to be pooled to complete a given task. “Simply speaking, we are connecting tasks and people,” the team explains. “Our goal is to predict who has the needed expertise to accomplish the task at hand.”

The researchers have created a formula that can pull in the most suitable experts from a database and that weights each expert according to various criteria for the specific task, their proof of principle was to pool experts to write an academic paper. They then “train” their expert finding model using a random selection of 1000 published papers. The team explains the procedure as follows:

“For each paper we fix the size of the candidate author pool at 100, containing the real authors, and then randomly selected ones. We then create 20 sets of authors randomly selected from the pool along with one set of actual authors (all sets are of equal size). Data from one half of the randomly selected papers is used to train the model. The other half is used to evaluate the model.” They add that, “We have performed several different training/testing data splits and obtained similar results.”

Presumably, once proven more widely the model could be incorporated into software that might be used by recruitment agencies, headhunters, and individuals or groups hoping to pull together experts for particular projects and job vacancies.

Research Blogging IconNeil Rubens, Mikko Vilenius, Toshio Okamoto, & Dain Kaplan (2010). CAFE: Collaboration Aimed at Finding Experts Int. J. Knowledge and Web Intelligence, 1 (3/4), 169-186

Sweet sensors

Nothing new under the sun, as the bard said, and how true it is sometimes. No sooner had I posted a news article on spectroscopynow.com entitled “Sweet sense of GOD” than Santhosh Challa, a Senior Scientist at Merck & Co in New Jersey, USA, got in touch
to tell me that his team had also recently published work on a similar technique using ionic liquids in glucose sensing. In the “GOD” work, researchers had developed a glucose sensor based on a room-temperature ionic liquid rather than a conventional solvent to give it much better acid-resistance than other sensors used in diabetes and blood sugar monitoring.

Challa and his team seem to have extended the concept somewhat. “In this particular work, we applied an amino acid based fluorescent ionic liquid, that shows not only the capability of differentiating between enantiomeric forms of glucose, but also show the capability of differentiating between different kinds sugars like glucose and mannose,” explained Challa. “This particular ionic liquid is also fluorescent, so its reporting nature is highly useful in sensing fluorescent and as well as non-fluorescent enantiomeric forms of drugs.”

The team also applied multi-dimensional fluorescent studies and statistical analysis to demonstrate that their approach can show these capabilities in the millimolar range. They also explain in detail the studies needed to explain the fluorescence phenomenon and to use the complex spectral properties to their advantage in chiral sugar sensing.

Research Blogging IconBwambok, D., Challa, S., Lowry, M., & Warner, I. (2010). Amino Acid-Based Fluorescent Chiral Ionic Liquid for Enantiomeric Recognition Analytical Chemistry, 82 (12), 5028-5037 DOI: 10.1021/ac9027774

Just say no to sunscreen nanophobia!

Once again we’re at a pivotal point in human development, where a novel technology might allow us to improve the lot of millions, perhaps billions of people across the globe and yet activists are invoking the precautionary principle and informing consumers of the possible dangers therein. As happened with vaccines, nuclear energy, genetically modified crops, stem cells and cloning, and the whole of the chemical and pharmaceuticals industry, they talk of known unknowns, unknown knowns, unknown unknowns and the need to avoid any risk at any price.

The latest scare-mongering is in a similar vein and comes just as the Northern summer reaches its sunniest peak. Apparently some sunscreen manufacturers are already going “nano free” because of activist pressure despite the fact that there is scant evidence that any of the so-called nanoscopic ingredients in modern sunscreens cause any harm whatsoever, while they’re protecting you from harmful sun exposure. It’s odd isn’t it? The marketers and sunscreen and cosmetics manufacturers jumped on the nano bandwagon a decade ago claiming all kinds of miraculous effects for their supposedly new ingredients, and yet today, they’re shying away from them.

In a recent paper in the International Journal of Biomedical Nanoscience and Nanotechnology (2010, 1, 1, 87-94), a lawyer at Australian National University, in Canberra, discusses the issues surrounding nanoparticles and aggregated nanoparticles in sunscreen.

“Currently, no health technology regulator internationally specifies distinct safety regulations or requirements that must be met by manufacturers using ENPs [engineered nanoparticles] in sunscreens or other health products,” he says. However, earlier in his paper Thomas Faunce points out that there are no published research results to suggest adverse effects partly because nanoparticles in sunscreen preparations , specifically zinc oxide and and titanium dioxide while forming free radicals in sunlight undergo “minimal dermal absorption… below the dead and highly keratinised cells of the stratum corneum.”

Am I missing something here? The paper first says that there is no obvious mechanism to suggest any risk other than free radical formation (which is after all caused by the UV absorption) and then suggests we must invoke the precautionary principle just in case. But, why?

Faunce adds that, “No government has yet established regulation to allow the public to make informed choices through proper labelling”. But, I’d like to know what he means by proper labelling. A proper label would perhaps say something like

WARNING This product contains nanoparticles that will protect you from sunlight by absorbing the energy of UV radiation, will only be absorbed by the upper layer of dead skin cells and so should be perfectly safe

Faunce talks of a “significant breakthrough for campaigners against the unregulated use of nanoparticulate sunscreens”, but one has to wonder why anyone should care about campaigners who are basing their concerns on non-facts. So what if apparently iconic sunscreen brands are now touting the fact that they’re nano-free, they know how to follow the market. But, it now means that consumers are left with old school sunscreens. I remember writing for Chemistry and Industry magazine back in the 1990s about evidence that certain conventional sunscreen formulations carried with them a cancer risk because their ingredients were indeed absorbed into deeper layers of the skin, unlike the nanoparticulate formulations.

Faunce refers to the three-quarters of 68 sunscreen brands surveyed as refusing to disclose whether or not their formulations contain nanomaterials and others admitting as if they’re somehow on trial.

I asked nanotechnology expert Andrew Maynard Director of the Risk Science Center at the University of Michigan, to comment on this odd scenario regarding the safety of nano-sunscreens. He points out that Faunce’s article seems to be predominantly focused on the labelling issue and the consumer’s right to know. “This is tricky, as even though the evidence indicates nanomaterials in sunscreens is pretty much a non-issue, there is still a question mark over how consumers and regulators actually know what the active ingredient is,” he told Sciencebase. However, he emphasises that the current state of science strongly indicates that healthy skin is a good barrier against nanoparticle penetration.

Maynard would argue that accurate ingredient identification is important, irrespective of whether the scientific consensus indicates there is a health issue or not. “In the case of nanoparticles in sunscreens, the evidence is strong that there is not a health issue,” he adds. ” Although, as always, there is a little wriggle room for doubt as the research isn’t 100% conclusive – once more a case of more research to dot the i’s and cross the T’s than taking action!” he adds.

Anyway, who said size doesn’t matter? Professor Tilman Butz, who has researched nanoparticle penetration through the skin and is the project leader of the (now complete ) EU Nanoderm Project, posted on Maynard’s blog suggesting that nanoparticles currently used are simply a non-starter when it comes to health issues with sunscreen:

In use are titanium dioxide and sometimes zinc oxide with primary particle sizes around 20 nm. They have a weight in the order of 1 MDa (1 million Daltons = weight of 1 million hydrogen atoms, expressed in molecular terminology although the particles are not molecules). There is general agreement that 0,5 kDa is the upper limit for dermal penetration. Hence, these particles are much too large (heavy) for dermal penetration.

In a climate where cancer organisations are forever trying to convince to avoid sun exposure (that’s another story: skin cancer and sun exposures ), one really has to wonder at the sense of activists trying to get active and useful materials removed from products that are purely a lifestyle choice in the first place. It’s not as if the manufacturers are forcing toxic sunscreen down our throats as they did with melamine contaminant in China not so long ago.

As far as I can tell, nano-sunscreens are more protective and companies who laid their towel on the best loungers by the pool earliest are now back pedalling purely for marketing purposes not because of the precautionary principle or any shift in safety knowledge.

Research Blogging Icon Thomas Faunce (2010). Exploring the safety of nanoparticles in Australian sunscreens Int. J. Biomed. Nanosci. Nanotechnol., 1 (1), 87-94

Spectral science news

These are my links for July 15th from 12:27 to 12:32:

  • Herpes invasion – There are eight herpes viruses that cause human diseases. Depending on how they affect us, they result in oral and genital herpes, the latter of which is present in almost a third of the US population. Currently, there is no cure for herpes viruses. Upon infection, the viruses remain in the body for life and can stay inactive for long periods of time. Herpes is also a leading cause of viral blindness and viral encephalitis. An X-ray study has now revealed the unusual structure of a key protein complex that allows a herpes virus to invade cells.
  • Sweet sense of GOD – A glucose sensor based on a room-temperature ionic liquid rather than conventional solvents has much better acid-resistance than other sensors and so could be developed into a much more robust sensor device for diabetes monitoring.
  • The banana blues – An intriguing compound found in ripening or senescent parts of the banana plant is a breakdown product of chlorophyll that makes the leaves glow blue under ultraviolet light. New insights into this and related compounds suggest that they are present to attract fruit-eating animals that then spread the plant's seeds.
  • Iodine analysis – Iodine is an essential part of a healthy diet as it is needed by the thyroid gland for the biosynthesis of thyroid hormones; an excessive intake iodine can lead to thyroid disorders, however. "Seafood, iodized table salt, milk and dairy products are common sources of iodine. Now, a new approach to spectroscopic analysis of foods could improve baby formula milk and other products by allowing total iodine content to be determined more precisely.

Science careers, damping and oil

My latest editorial contribution to Materials Today and a little more oily news.

  • Paradigms, peers, and patents – For every paradigm-shifting breakthrough in science there are a plethora of failed experiments, myriad grant applications, patent pressures, and the activation energy barrier that is peer-reviewed publication to overcome. So with all those issues to face is science a good career?
  • Composite damping is music to the ears – A newly developed material could be used to reduce the effects of vibration by absorbing energy through an accordion-like movement of its internal structure.
  • BP to make new attempt to plug Gulf of Mexico oil leak – This is just crazy, they've still not fixed this problem? What's taking them so long (apart from the fact that they're reluctant to spend the necessary money to get the job done?) It doesn't take them this long to sink a well and start making profits from their black gold does it? Meanwhile, the scale of the disaster is yet to reach the extent that they forecast and that the media scaremongered about, but that's no excuse not to get the thing plugged.

Extraterrestrial molecules and the plausibility of life on earth

Latest scientific news with a spectroscopic angle

  • Extraterrestrial molecules – An astronomical infrared study reveals one of the most complex organic molecules yet found in the interstellar medium – anthracene – offering possible new clues to the way the building blocks of life might have emerged.
  • Wrinkles improve spectra – Polydimethylsiloxane can be used to produce wrinkles on a glass surface to pattern lines of gold which are twice as effective as conventional SERS substrates, according to German and Spanish researchers.
  • Chemical communications – A new system for non-electronic communication that can transmit alphanumeric information encoded as pulses of light, over intervals of hours, without needing electricity and so remaining operational even without batteries in remote, hazardous or poor locations.
  • Terrestrial life is plausible – A 2009 explanation for how the building blocks of life could have been activated now has new crystallographic evidence to support the emergence of the "RNA world" 4 billion years ago.
  • Cheating spectroscopy – REDOR, a new form of NMR has been used by researchers in the US to figure out why the cheatgrass weed out-strips soy crops, particularly in higher carbon dioxide. Their results have serious implications for agriculture in the face of climate change.
  • It is brain surgery, you know? – MRI scans allow surgeons to safely and effectively operate inside the human brain through small incisions in the natural creases of the eyelid rather than drilling through skull to get to the grey matter at the front of the brain.

Molecules, materials and British science

This is my first batch of delicious science links for this week:

  • Dendrimersome library – A library of supramolecular materials that can form hollow vesicles with potential in therapeutic drug and gene delivery, imaging diagnostics, as well as the cosmetics industry has been developed by researchers in Finland and the USA.
  • Telescopic eye implant – The US FDA has approve a telescopic eye implant for late-stage macular degeneration
  • David Willetts – Science, Innovation and the Economy – What does the British government think of science?
  • Great news for Gulf of Mexico oil companies – US appeals court opens door to new drilling in Gulf of Mexico
  • Sex in the desert – University of Arizona research suggests that sex is nothing more than a very pleasurable way to fix DNA
  • The little flaw in the longevity-gene study – As ever, genetics studies are not as simple as you'd think. The so-called "longevity genes" reported by others last week allegedly turn out to be the product of a faulty DNA chip and inept peer review.